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LCMS_Read

Node​

Node Description​

Parse and ingest data from an LCMS file into Ganymede data lake.

Node Attributes​

  • input_file_lcms
    • Glob pattern matching the LCMS file to be read.

Example​

The Node configuration below would capture mzML files:

lcms: *.mzML

User-Defined Python​

Function to process LCMS file data

Parameters​

  • lcms_file_paths : str
    • Path to LCMS file to be read
  • ganymede_context : GanymedeContext
    • Ganymede context variable, which stores flow run metadata

Returns​

NodeReturn Object containing data to store in data lake and/or file storage